MarkerParentId (SnpEff 5.4 API)

java.lang.Object

org.snpeff.interval.Interval

org.snpeff.interval.Marker

org.snpeff.interval.MarkerParentId

All Implemented Interfaces:: Serializable, Cloneable, Comparable<Interval>, TxtSerializable

public class MarkerParentId extends Marker

This is a marker used as a 'fake' parent during data serialization

Author:

pcingola

See Also:

Field Summary

Fields inherited from class Marker
type

Fields inherited from class Interval
chromosomeNameOri, end, id, parent, start, strandMinus
Constructor Summary

Constructors

Constructor

Description

MarkerParentId(int parentId)
Method Summary

Modifier and Type

Method

Description

int

getParentId()

Methods inherited from class Marker
adjust, apply, applyDel, applyDup, applyIns, applyMixed, clone, cloneShallow, codonTable, compareTo, compareToPos, distance, distanceBases, getParent, getType, idChain, idChain, idChain, includes, intersect, isAdjustIfParentDoesNotInclude, isDeferredAnalysis, isShowWarningIfParentDoesNotInclude, minus, query, query, readTxt, serializeParse, serializeSave, shouldApply, toString, union, variantEffect, variantEffectNonRef

Methods inherited from class Interval
equals, findParent, getChromosome, getChromosomeName, getChromosomeNameOri, getChromosomeNum, getEnd, getGenome, getGenomeName, getId, getStart, getStrand, hashCode, intersects, intersects, intersects, intersects, intersectSize, isCircular, isSameChromo, isStrandMinus, isStrandPlus, isValid, setChromosomeNameOri, setEnd, setId, setParent, setStart, setStrandMinus, shiftCoordinates, size, toStr, toStringAsciiArt, toStrPos

Methods inherited from class Object
equals, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details
- MarkerParentId
  
  public MarkerParentId(int parentId)
Method Details
- getParentId
  
  public int getParentId()